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Identification and Development of 2,3-Dihydropyrrolo[1,2-a]quinazolin-5(1H)-one Inhibitors Targeting Bromodomains within the Switch/Sucrose Nonfermenting Complex.

Sutherell CL, Tallant C, Monteiro OP, Yapp C, Fuchs JE, Fedorov O, Siejka P, Müller S, Knapp S, Brenton JD, Brennan PE, Ley SV - J. Med. Chem. (2016)

Bottom Line: Bromodomain containing proteins PB1, SMARCA4, and SMARCA2 are important components of SWI/SNF chromatin remodeling complexes.We identified bromodomain inhibitors that target these proteins and display unusual binding modes involving water displacement from the KAc binding site.The best compound binds the fifth bromodomain of PB1 with a KD of 124 nM, SMARCA2B and SMARCA4 with KD values of 262 and 417 nM, respectively, and displays excellent selectivity over bromodomains other than PB1, SMARCA2, and SMARCA4.

View Article: PubMed Central - PubMed

Affiliation: Department of Chemistry, University of Cambridge , Lensfield Road, Cambridge, CB2 1EW, U.K.

ABSTRACT
Bromodomain containing proteins PB1, SMARCA4, and SMARCA2 are important components of SWI/SNF chromatin remodeling complexes. We identified bromodomain inhibitors that target these proteins and display unusual binding modes involving water displacement from the KAc binding site. The best compound binds the fifth bromodomain of PB1 with a KD of 124 nM, SMARCA2B and SMARCA4 with KD values of 262 and 417 nM, respectively, and displays excellent selectivity over bromodomains other than PB1, SMARCA2, and SMARCA4.

No MeSH data available.


Related in: MedlinePlus

General Route to Core 2,3-Dihydropyrrolo[1,2-a]quinazolin-5(1H)-ones and Their DerivativesReagents and conditions: (a)4-chlorobutanoyl chloride, Et3N, THF, 0 °C to rt,12 h, 92%; (b) tBuOK, THF, rt, 1 h, 77%;(c) N,N-dialkylformamide, POCl3, CH2Cl2, 70 °C, 16–74%;(d) H-NR2, DMAP, EtOH, 70 °C, 24–96 h, 39–81%.For R see Table 1.
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sch1: General Route to Core 2,3-Dihydropyrrolo[1,2-a]quinazolin-5(1H)-ones and Their DerivativesReagents and conditions: (a)4-chlorobutanoyl chloride, Et3N, THF, 0 °C to rt,12 h, 92%; (b) tBuOK, THF, rt, 1 h, 77%;(c) N,N-dialkylformamide, POCl3, CH2Cl2, 70 °C, 16–74%;(d) H-NR2, DMAP, EtOH, 70 °C, 24–96 h, 39–81%.For R see Table 1.


Identification and Development of 2,3-Dihydropyrrolo[1,2-a]quinazolin-5(1H)-one Inhibitors Targeting Bromodomains within the Switch/Sucrose Nonfermenting Complex.

Sutherell CL, Tallant C, Monteiro OP, Yapp C, Fuchs JE, Fedorov O, Siejka P, Müller S, Knapp S, Brenton JD, Brennan PE, Ley SV - J. Med. Chem. (2016)

General Route to Core 2,3-Dihydropyrrolo[1,2-a]quinazolin-5(1H)-ones and Their DerivativesReagents and conditions: (a)4-chlorobutanoyl chloride, Et3N, THF, 0 °C to rt,12 h, 92%; (b) tBuOK, THF, rt, 1 h, 77%;(c) N,N-dialkylformamide, POCl3, CH2Cl2, 70 °C, 16–74%;(d) H-NR2, DMAP, EtOH, 70 °C, 24–96 h, 39–81%.For R see Table 1.
© Copyright Policy
Related In: Results  -  Collection

License
Show All Figures
getmorefigures.php?uid=PMC4920105&req=5

sch1: General Route to Core 2,3-Dihydropyrrolo[1,2-a]quinazolin-5(1H)-ones and Their DerivativesReagents and conditions: (a)4-chlorobutanoyl chloride, Et3N, THF, 0 °C to rt,12 h, 92%; (b) tBuOK, THF, rt, 1 h, 77%;(c) N,N-dialkylformamide, POCl3, CH2Cl2, 70 °C, 16–74%;(d) H-NR2, DMAP, EtOH, 70 °C, 24–96 h, 39–81%.For R see Table 1.
Bottom Line: Bromodomain containing proteins PB1, SMARCA4, and SMARCA2 are important components of SWI/SNF chromatin remodeling complexes.We identified bromodomain inhibitors that target these proteins and display unusual binding modes involving water displacement from the KAc binding site.The best compound binds the fifth bromodomain of PB1 with a KD of 124 nM, SMARCA2B and SMARCA4 with KD values of 262 and 417 nM, respectively, and displays excellent selectivity over bromodomains other than PB1, SMARCA2, and SMARCA4.

View Article: PubMed Central - PubMed

Affiliation: Department of Chemistry, University of Cambridge , Lensfield Road, Cambridge, CB2 1EW, U.K.

ABSTRACT
Bromodomain containing proteins PB1, SMARCA4, and SMARCA2 are important components of SWI/SNF chromatin remodeling complexes. We identified bromodomain inhibitors that target these proteins and display unusual binding modes involving water displacement from the KAc binding site. The best compound binds the fifth bromodomain of PB1 with a KD of 124 nM, SMARCA2B and SMARCA4 with KD values of 262 and 417 nM, respectively, and displays excellent selectivity over bromodomains other than PB1, SMARCA2, and SMARCA4.

No MeSH data available.


Related in: MedlinePlus