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Genome sequencing and annotation of Morganella sp. SA36.

Selim S, Hassan S, Hagagy N - Genom Data (2015)

Bottom Line: The draft genome size is 2,564,439 bp with a G + C content of 51.1% and contains 6 rRNA sequence (single copies of 5S, 16S & 23S rRNA).The genome sequence can be accessed at DDBJ/EMBL/GenBank under the accession no.LDNQ00000000.

View Article: PubMed Central - PubMed

Affiliation: Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, Aljouf University, Sakaka, P.O. 2014, Saudi Arabia ; Microbiology and Botany Department, Faculty of Science, Suez Canal University, Ismailia, P.O.Box 41522, Egypt.

ABSTRACT
We report draft genome sequence of Morganella sp. Strain SA36, isolated from water spring in Aljouf region, Saudi Arabia. The draft genome size is 2,564,439 bp with a G + C content of 51.1% and contains 6 rRNA sequence (single copies of 5S, 16S & 23S rRNA). The genome sequence can be accessed at DDBJ/EMBL/GenBank under the accession no. LDNQ00000000.

No MeSH data available.


Related in: MedlinePlus

Subsystem distribution of Morganella strain SA36 (based on RAST annotation server).
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f0005: Subsystem distribution of Morganella strain SA36 (based on RAST annotation server).

Mentions: A total of 3229 protein coding sequences in 322 subsystems were functionally annotated by Rapid Annotation using the Subsystems Technology (RAST) [3] server (Fig. 1). Genome analysis revealed that the genome of Morganella sp. strain SA36 contains various gene clusters for biosynthesis of secondary metabolites and antimicrobial peptides. The draft genome was annotated using an automated annotation pipeline based on the Prodigal gene prediction algorithm [4], which predicted 2552 candidate protein-encoding gene models for strain SA36. The predicted CDSs were used to search the NCBI non-redundant database using BLAST tools [5]. Genome analysis revealed that the genome of Morganella sp. SA36 contains various gene clusters encoding putative virulence genes and heavy metal resistance proteins (cobalt, molybdenum, manganese and copper).


Genome sequencing and annotation of Morganella sp. SA36.

Selim S, Hassan S, Hagagy N - Genom Data (2015)

Subsystem distribution of Morganella strain SA36 (based on RAST annotation server).
© Copyright Policy - CC BY-NC-ND
Related In: Results  -  Collection

License
Show All Figures
getmorefigures.php?uid=PMC4664680&req=5

f0005: Subsystem distribution of Morganella strain SA36 (based on RAST annotation server).
Mentions: A total of 3229 protein coding sequences in 322 subsystems were functionally annotated by Rapid Annotation using the Subsystems Technology (RAST) [3] server (Fig. 1). Genome analysis revealed that the genome of Morganella sp. strain SA36 contains various gene clusters for biosynthesis of secondary metabolites and antimicrobial peptides. The draft genome was annotated using an automated annotation pipeline based on the Prodigal gene prediction algorithm [4], which predicted 2552 candidate protein-encoding gene models for strain SA36. The predicted CDSs were used to search the NCBI non-redundant database using BLAST tools [5]. Genome analysis revealed that the genome of Morganella sp. SA36 contains various gene clusters encoding putative virulence genes and heavy metal resistance proteins (cobalt, molybdenum, manganese and copper).

Bottom Line: The draft genome size is 2,564,439 bp with a G + C content of 51.1% and contains 6 rRNA sequence (single copies of 5S, 16S & 23S rRNA).The genome sequence can be accessed at DDBJ/EMBL/GenBank under the accession no.LDNQ00000000.

View Article: PubMed Central - PubMed

Affiliation: Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, Aljouf University, Sakaka, P.O. 2014, Saudi Arabia ; Microbiology and Botany Department, Faculty of Science, Suez Canal University, Ismailia, P.O.Box 41522, Egypt.

ABSTRACT
We report draft genome sequence of Morganella sp. Strain SA36, isolated from water spring in Aljouf region, Saudi Arabia. The draft genome size is 2,564,439 bp with a G + C content of 51.1% and contains 6 rRNA sequence (single copies of 5S, 16S & 23S rRNA). The genome sequence can be accessed at DDBJ/EMBL/GenBank under the accession no. LDNQ00000000.

No MeSH data available.


Related in: MedlinePlus