Whole genome sequencing of Halomonas sp. SUBG004 isolated from Little Rann of Kutch, a desert of India.
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Chemotaxonomic and phylogenetic properties were consistent with its classification in the genus Halomonas.Here we report the whole genome sequence of Halomonas sp.SUBG004 deposited in DDBJ/EMBL/GenBank under accession number JPEU0100000 which provides insights for salt stress adaptation through betaine synthesis.
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Affiliation: Laboratory of plant Biotechnology and Genetic Engineering, UGC-CAS Department of Biosciences, Saurashtra University, Rajkot, India.
ABSTRACT
A salt tolerant strain, designated as SUBG004, was isolated from the desert of India, Little Rann of Kutch. The organism is a Gram-negative, facultatively anaerobic and rod shaped bacterium. Chemotaxonomic and phylogenetic properties were consistent with its classification in the genus Halomonas. Here we report the whole genome sequence of Halomonas sp. SUBG004 deposited in DDBJ/EMBL/GenBank under accession number JPEU0100000 which provides insights for salt stress adaptation through betaine synthesis. No MeSH data available. Related in: MedlinePlus |
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f0005: Subsystem distribution of Halomonas sp. SUBG004 (based on RAST annotation server). Mentions: Coding sequences were functionally annotated by Rapid Annotation using the Subsystems Technology (RAST) server in 451 subsystems (Fig. 1). Gene sequences of a betaine synthesis operon putatively encoding BetI: HTH type transcriptional regulator, BetA:Choline dehydrogenase (EC 1.1.99.1) and BetB:Betaine aldehyde dehydrogenase (EC 1.2.18) were identified using the Kyoto Encyclopedia of Genes and Genomes (KEGG) database available in RAST [4]. |
View Article: PubMed Central - PubMed
Affiliation: Laboratory of plant Biotechnology and Genetic Engineering, UGC-CAS Department of Biosciences, Saurashtra University, Rajkot, India.
No MeSH data available.