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Data in support of the proteomic analysis of plasma membrane and tonoplast from the leaves of mangrove plant Avicennia officinalis.

Krishnamurthy P, Tan XF, Lim TK, Lim TM, Kumar PP, Loh CS, Lin Q - Data Brief (2015)

Bottom Line: The data provides information in support of the research article, Proteomics 2014, 14, 2545-2557 [1].Raw data is available from the ProteomeXchange Consortium via the PRIDE partnerRepository [2] with the dataset identifier PXD000837.Based on GO annotation, identified proteins were predicted to be involved in various biological processes.

View Article: PubMed Central - PubMed

Affiliation: Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, 117543, Singapore ; NUS Environmental Research Institute (NERI), National University of Singapore, Singapore.

ABSTRACT
The data provides information in support of the research article, Proteomics 2014, 14, 2545-2557 [1]. Raw data is available from the ProteomeXchange Consortium via the PRIDE partnerRepository [2] with the dataset identifier PXD000837. Plasma membrane and tonoplast proteins from the leaves of Avicennia officinalis were identified using gel electrophoresis (one and two dimensional) combined with LC-MS analysis. Based on GO annotation, identified proteins were predicted to be involved in various biological processes.

No MeSH data available.


MS/MS Data analysis.
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f0015: MS/MS Data analysis.

Mentions: Fig. 3 shows the representative protein sequence identified with confidence level <95% but ≥50% in the study. (A) Protein sequence with identified peptide sequences highlighted in yellow. (B) Table with details of identified peptides. (C) MS/MS spectrum of the identified peptide IEDDLKVR. (D) Assignment of fragmentation for the identified peptide.


Data in support of the proteomic analysis of plasma membrane and tonoplast from the leaves of mangrove plant Avicennia officinalis.

Krishnamurthy P, Tan XF, Lim TK, Lim TM, Kumar PP, Loh CS, Lin Q - Data Brief (2015)

MS/MS Data analysis.
© Copyright Policy - CC BY
Related In: Results  -  Collection

License
Show All Figures
getmorefigures.php?uid=PMC4644245&req=5

f0015: MS/MS Data analysis.
Mentions: Fig. 3 shows the representative protein sequence identified with confidence level <95% but ≥50% in the study. (A) Protein sequence with identified peptide sequences highlighted in yellow. (B) Table with details of identified peptides. (C) MS/MS spectrum of the identified peptide IEDDLKVR. (D) Assignment of fragmentation for the identified peptide.

Bottom Line: The data provides information in support of the research article, Proteomics 2014, 14, 2545-2557 [1].Raw data is available from the ProteomeXchange Consortium via the PRIDE partnerRepository [2] with the dataset identifier PXD000837.Based on GO annotation, identified proteins were predicted to be involved in various biological processes.

View Article: PubMed Central - PubMed

Affiliation: Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, 117543, Singapore ; NUS Environmental Research Institute (NERI), National University of Singapore, Singapore.

ABSTRACT
The data provides information in support of the research article, Proteomics 2014, 14, 2545-2557 [1]. Raw data is available from the ProteomeXchange Consortium via the PRIDE partnerRepository [2] with the dataset identifier PXD000837. Plasma membrane and tonoplast proteins from the leaves of Avicennia officinalis were identified using gel electrophoresis (one and two dimensional) combined with LC-MS analysis. Based on GO annotation, identified proteins were predicted to be involved in various biological processes.

No MeSH data available.