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Whole Blood Transcriptome Analysis of Mycoplasma mycoides Subsp. mycoides-Infected Cattle Confirms Immunosuppression but Does Not Reflect Local Inflammation.

Rodrigues V, Holzmuller P, Puech C, Wesonga H, Thiaucourt F, Manso-Silván L - PLoS ONE (2015)

Bottom Line: These affected functions were consistent with the results of previous in vitro immunological studies.However, microarray and qPCR validation results did not highlight pro-inflammatory molecules (such as TNFα, TLR2, IL-12B and IL-6), whereas inflammation is one of the most characteristic traits of acute CBPP.This global gene expression pattern may be considered as the result, in blood, of the local pulmonary response and the systemic events occurring during acute CBPP.

View Article: PubMed Central - PubMed

Affiliation: CIRAD, UMR15 CMAEE, F-34398 Montpellier, France; INRA, UMR1309 CMAEE, F-34398 Montpellier, France.

ABSTRACT
Contagious bovine pleuropneumonia (CBPP), caused by Mycoplasma mycoides subsp. mycoides (Mmm), is a severe respiratory disease of cattle responsible for major economic losses in sub-Saharan Africa. Disease control relies mainly on the use of empirically attenuated vaccines that provide limited protection. Thus, understanding the virulence mechanisms used by Mmm as well as the role of the host immune system in disease development, persistence, and control is a prerequisite for the development of new, rationally designed control strategies. The aim of this study was to assess the use of whole blood transcriptome analysis to study cattle-Mmm interactions, starting by the characterization of the bovine response to Mmm infection during the acute form of the disease. For that purpose, we compared the transcriptome profile of whole blood from six cattle, before challenge by contact with Mmm-infected animals and at the appearance of first clinical signs, using a bovine microarray. Functional analysis revealed that 680 annotated genes were differentially expressed, with an overwhelming majority of down-regulated genes characterizing an immunosuppression. The main bio-functions affected were "organismal survival", "cellular development, morphology and functions" and "cell-to cell signaling and interactions". These affected functions were consistent with the results of previous in vitro immunological studies. However, microarray and qPCR validation results did not highlight pro-inflammatory molecules (such as TNFα, TLR2, IL-12B and IL-6), whereas inflammation is one of the most characteristic traits of acute CBPP. This global gene expression pattern may be considered as the result, in blood, of the local pulmonary response and the systemic events occurring during acute CBPP. Nevertheless, to understand the immune events occurring during disease, detailed analyses on the different immune cell subpopulations, either in vivo, at the local site, or in vitro, will be required. Whole blood transcriptome analysis remains an interesting approach for the identification of bio-signatures correlating to recovery and protection, which should facilitate the evaluation and validation of novel vaccine formulations.

No MeSH data available.


Related in: MedlinePlus

Hierarchical combined tree.Hierarchical cluster dendrogram, grouped by GeneSpring according to the similarity in the expression of 1115entities. Red lines represent increased mRNA level and blue lines represent decreased mRNA level, with Benjamini Hochberg False Discovery Rate corrected p-value < 5 10−2 and absolute fold change ≥ 2.
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pone.0139678.g002: Hierarchical combined tree.Hierarchical cluster dendrogram, grouped by GeneSpring according to the similarity in the expression of 1115entities. Red lines represent increased mRNA level and blue lines represent decreased mRNA level, with Benjamini Hochberg False Discovery Rate corrected p-value < 5 10−2 and absolute fold change ≥ 2.

Mentions: Hierarchical cluster analysis using the GeneSpring algorithm combined with the Euclidian similarity measure and centroid linkage rule on non-averaged status produced a combined dendrogram showing a clear distinction between the expression profiles of non-infected and infected animals (Fig 2). All microarray data can be downloaded from NCBI’s Gene Expression Omnibus (http://www.ncbi.nlm.nih.gov/geo/) with the GEO series accession number GSE70059.


Whole Blood Transcriptome Analysis of Mycoplasma mycoides Subsp. mycoides-Infected Cattle Confirms Immunosuppression but Does Not Reflect Local Inflammation.

Rodrigues V, Holzmuller P, Puech C, Wesonga H, Thiaucourt F, Manso-Silván L - PLoS ONE (2015)

Hierarchical combined tree.Hierarchical cluster dendrogram, grouped by GeneSpring according to the similarity in the expression of 1115entities. Red lines represent increased mRNA level and blue lines represent decreased mRNA level, with Benjamini Hochberg False Discovery Rate corrected p-value < 5 10−2 and absolute fold change ≥ 2.
© Copyright Policy
Related In: Results  -  Collection

License
Show All Figures
getmorefigures.php?uid=PMC4592004&req=5

pone.0139678.g002: Hierarchical combined tree.Hierarchical cluster dendrogram, grouped by GeneSpring according to the similarity in the expression of 1115entities. Red lines represent increased mRNA level and blue lines represent decreased mRNA level, with Benjamini Hochberg False Discovery Rate corrected p-value < 5 10−2 and absolute fold change ≥ 2.
Mentions: Hierarchical cluster analysis using the GeneSpring algorithm combined with the Euclidian similarity measure and centroid linkage rule on non-averaged status produced a combined dendrogram showing a clear distinction between the expression profiles of non-infected and infected animals (Fig 2). All microarray data can be downloaded from NCBI’s Gene Expression Omnibus (http://www.ncbi.nlm.nih.gov/geo/) with the GEO series accession number GSE70059.

Bottom Line: These affected functions were consistent with the results of previous in vitro immunological studies.However, microarray and qPCR validation results did not highlight pro-inflammatory molecules (such as TNFα, TLR2, IL-12B and IL-6), whereas inflammation is one of the most characteristic traits of acute CBPP.This global gene expression pattern may be considered as the result, in blood, of the local pulmonary response and the systemic events occurring during acute CBPP.

View Article: PubMed Central - PubMed

Affiliation: CIRAD, UMR15 CMAEE, F-34398 Montpellier, France; INRA, UMR1309 CMAEE, F-34398 Montpellier, France.

ABSTRACT
Contagious bovine pleuropneumonia (CBPP), caused by Mycoplasma mycoides subsp. mycoides (Mmm), is a severe respiratory disease of cattle responsible for major economic losses in sub-Saharan Africa. Disease control relies mainly on the use of empirically attenuated vaccines that provide limited protection. Thus, understanding the virulence mechanisms used by Mmm as well as the role of the host immune system in disease development, persistence, and control is a prerequisite for the development of new, rationally designed control strategies. The aim of this study was to assess the use of whole blood transcriptome analysis to study cattle-Mmm interactions, starting by the characterization of the bovine response to Mmm infection during the acute form of the disease. For that purpose, we compared the transcriptome profile of whole blood from six cattle, before challenge by contact with Mmm-infected animals and at the appearance of first clinical signs, using a bovine microarray. Functional analysis revealed that 680 annotated genes were differentially expressed, with an overwhelming majority of down-regulated genes characterizing an immunosuppression. The main bio-functions affected were "organismal survival", "cellular development, morphology and functions" and "cell-to cell signaling and interactions". These affected functions were consistent with the results of previous in vitro immunological studies. However, microarray and qPCR validation results did not highlight pro-inflammatory molecules (such as TNFα, TLR2, IL-12B and IL-6), whereas inflammation is one of the most characteristic traits of acute CBPP. This global gene expression pattern may be considered as the result, in blood, of the local pulmonary response and the systemic events occurring during acute CBPP. Nevertheless, to understand the immune events occurring during disease, detailed analyses on the different immune cell subpopulations, either in vivo, at the local site, or in vitro, will be required. Whole blood transcriptome analysis remains an interesting approach for the identification of bio-signatures correlating to recovery and protection, which should facilitate the evaluation and validation of novel vaccine formulations.

No MeSH data available.


Related in: MedlinePlus