GalaxyPepDock: a protein-peptide docking tool based on interaction similarity and energy optimization.
Bottom Line: Therefore, effective protein-peptide docking techniques can provide the basis for potential therapeutic applications by enabling an atomic-level understanding of protein interactions.The performance of GalaxyPepDock is superior to those of the other currently available web servers when tested on the PeptiDB set and on recently released complex structures.When tested on the CAPRI target 67, GalaxyPepDock generates models that are more accurate than the best server models submitted during the CAPRI blind prediction experiment.
Affiliation: Department of Chemistry, Seoul National University, Seoul 151-747, Korea.Show MeSH
Related in: MedlinePlus
Affiliation: Department of Chemistry, Seoul National University, Seoul 151-747, Korea.