GalaxyPepDock: a protein-peptide docking tool based on interaction similarity and energy optimization.
Bottom Line: Therefore, effective protein-peptide docking techniques can provide the basis for potential therapeutic applications by enabling an atomic-level understanding of protein interactions.With the increasing number of protein-peptide structures deposited in the protein data bank, the prediction accuracy of protein-peptide docking can be enhanced by utilizing the information provided by the database.The performance of GalaxyPepDock is superior to those of the other currently available web servers when tested on the PeptiDB set and on recently released complex structures.
Affiliation: Department of Chemistry, Seoul National University, Seoul 151-747, Korea.Show MeSH
Related in: MedlinePlus
Affiliation: Department of Chemistry, Seoul National University, Seoul 151-747, Korea.