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Qualitative, semi-quantitative, and quantitative simulation of the osmoregulation system in yeast.

Pang W, Coghill GM - BioSystems (2015)

Bottom Line: This model was then simulated qualitatively, semi-quantitatively, and quantitatively.The obtained simulation results are presented with an analysis.Finally the future development of the Morven framework for modelling the dynamic biological systems is discussed.

View Article: PubMed Central - PubMed

Affiliation: School of Natural and Computing Sciences, University of Aberdeen, Aberdeen AB24 3UE, UK. Electronic address: pang.wei@abdn.ac.uk.

No MeSH data available.


The quantitative simulation with Morven when Πe = 0.558 Osm.
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fig0025: The quantitative simulation with Morven when Πe = 0.558 Osm.

Mentions: The parameter values used for quantitative and semi-quantitative simulation are the same as those in the original Gennemark model, as listed in Table 6. Fig. 5 shows the quantitative simulation performed by Morven when Πe = 0.558 Osm. Fig. 6 shows the change of the cell volume during the stress response process as this cannot be easily see from Fig. 5. The simulation results were further verified by numerical simulation using Python + Scipy. It is shown that results obtained from Morven are the same as those from conventional numerical simulation methods.


Qualitative, semi-quantitative, and quantitative simulation of the osmoregulation system in yeast.

Pang W, Coghill GM - BioSystems (2015)

The quantitative simulation with Morven when Πe = 0.558 Osm.
© Copyright Policy - CC BY
Related In: Results  -  Collection

License
Show All Figures
getmorefigures.php?uid=PMC4441110&req=5

fig0025: The quantitative simulation with Morven when Πe = 0.558 Osm.
Mentions: The parameter values used for quantitative and semi-quantitative simulation are the same as those in the original Gennemark model, as listed in Table 6. Fig. 5 shows the quantitative simulation performed by Morven when Πe = 0.558 Osm. Fig. 6 shows the change of the cell volume during the stress response process as this cannot be easily see from Fig. 5. The simulation results were further verified by numerical simulation using Python + Scipy. It is shown that results obtained from Morven are the same as those from conventional numerical simulation methods.

Bottom Line: This model was then simulated qualitatively, semi-quantitatively, and quantitatively.The obtained simulation results are presented with an analysis.Finally the future development of the Morven framework for modelling the dynamic biological systems is discussed.

View Article: PubMed Central - PubMed

Affiliation: School of Natural and Computing Sciences, University of Aberdeen, Aberdeen AB24 3UE, UK. Electronic address: pang.wei@abdn.ac.uk.

No MeSH data available.