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CancerPPD: a database of anticancer peptides and proteins.

Tyagi A, Tuknait A, Anand P, Gupta S, Sharma M, Mathur D, Joshi A, Singh S, Gautam A, Raghava GP - Nucleic Acids Res. (2014)

Bottom Line: Besides this primary information, CancerPPD stores predicted tertiary structures as well as peptide sequences in SMILES format.In order to assist users, a number of web-based tools have been integrated, these include keyword search, data browsing, sequence and structural similarity search.We believe that CancerPPD will be very useful in designing peptide-based anticancer therapeutics.

View Article: PubMed Central - PubMed

Affiliation: Bioinformatics Centre, CSIR-Institute of Microbial Technology, Chandigarh 160036, Punjab, India.

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Related in: MedlinePlus

Architecture of CancerPPD.
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Related In: Results  -  Collection

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Figure 1: Architecture of CancerPPD.

Mentions: After the collection and compilation of all the information, the database was launched using Apache HTTP server on Linux Platform. MySQL an object-relational database management system was used to manage all data in the back-end. It provides commands to retrieve and store the data into the database. HTML, PHP and JAVA scripts were used to improve the front-end web interface. All common gateway interface and database interfacing scripts were written in the PHP and Perl programming language. The architecture of CancerPPD is shown in Figure 1.


CancerPPD: a database of anticancer peptides and proteins.

Tyagi A, Tuknait A, Anand P, Gupta S, Sharma M, Mathur D, Joshi A, Singh S, Gautam A, Raghava GP - Nucleic Acids Res. (2014)

Architecture of CancerPPD.
© Copyright Policy - creative-commons
Related In: Results  -  Collection

License
Show All Figures
getmorefigures.php?uid=PMC4384006&req=5

Figure 1: Architecture of CancerPPD.
Mentions: After the collection and compilation of all the information, the database was launched using Apache HTTP server on Linux Platform. MySQL an object-relational database management system was used to manage all data in the back-end. It provides commands to retrieve and store the data into the database. HTML, PHP and JAVA scripts were used to improve the front-end web interface. All common gateway interface and database interfacing scripts were written in the PHP and Perl programming language. The architecture of CancerPPD is shown in Figure 1.

Bottom Line: Besides this primary information, CancerPPD stores predicted tertiary structures as well as peptide sequences in SMILES format.In order to assist users, a number of web-based tools have been integrated, these include keyword search, data browsing, sequence and structural similarity search.We believe that CancerPPD will be very useful in designing peptide-based anticancer therapeutics.

View Article: PubMed Central - PubMed

Affiliation: Bioinformatics Centre, CSIR-Institute of Microbial Technology, Chandigarh 160036, Punjab, India.

Show MeSH
Related in: MedlinePlus