BioModels: ten-year anniversary.
Bottom Line: BioModels currently hosts over 1200 models derived directly from the literature, as well as in excess of 140,000 models automatically generated from pathway resources.This article describes updates to the resource over this period, which include changes to the user interface, the annotation profiles of models in the curation pipeline, major infrastructure changes, ability to perform online simulations and the availability of model content in Linked Data form.We also outline planned improvements to cope with a diverse array of new challenges.
Affiliation: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK email@example.com.Show MeSH
Mentions: Over the years, the web interface to BioModels has seen a number of rounds of improvement culminating in the current version (Figure 2). With the growing number of models and their components, it has become increasingly difficult for a user to efficiently retrieve their target models. This issue will be exacerbated by the growing number of models generated by automated processing of genomic information. BioModels now provides a number of ways to browse models, a much improved search interface, and also permits the programmatic search and download of models through Web Services (15).
Affiliation: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK firstname.lastname@example.org.