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Non-contiguous finished genome sequence and description of Kurthia massiliensis sp. nov.

Roux V, El Karkouri K, Lagier JC, Robert C, Raoult D - Stand Genomic Sci (2012)

Bottom Line: K. massiliensis is a Gram-positive aerobic rod.Here we describe the features of this organism, together with the complete genome sequence and annotation.The 3,199,090 bp long genome contains 3,240 protein-coding genes and 86 RNA genes, including between 3 and 4 rRNA genes.

View Article: PubMed Central - PubMed

Affiliation: Aix Marseille Université, URMITE, Faculté de médecine, Aix-Marseille Université

ABSTRACT
Kurthia massiliensis strain JC30(T) sp. nov. is the type strain of K. massiliensis sp. nov., a new species within the genus Kurthia. This strain, whose genome is described here, was isolated from the fecal flora of a healthy patient. K. massiliensis is a Gram-positive aerobic rod. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 3,199,090 bp long genome contains 3,240 protein-coding genes and 86 RNA genes, including between 3 and 4 rRNA genes.

No MeSH data available.


Related in: MedlinePlus

Graphical circular map of Kurthia massiliensis genome. From outside to the center: Genes on both strands, genes on foward strand, genes on reverse strand and genes colored by COG categories.
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f7: Graphical circular map of Kurthia massiliensis genome. From outside to the center: Genes on both strands, genes on foward strand, genes on reverse strand and genes colored by COG categories.

Mentions: The genome is 3,199,090 bp long with a 39.26% GC content (Table 4, Figure 7). Of the 3,326 predicted genes, 3,240 were protein-coding genes, and 86 were RNAs. A total of 2,425 genes (74.8%) were assigned a putative function. The remaining genes were annotated as either hypothetical proteins or proteins of unknown functions. The distribution of genes into COGs functional categories is presented in Table 5. The properties and the statistics of the genome are summarized in Tables 4 and 5.


Non-contiguous finished genome sequence and description of Kurthia massiliensis sp. nov.

Roux V, El Karkouri K, Lagier JC, Robert C, Raoult D - Stand Genomic Sci (2012)

Graphical circular map of Kurthia massiliensis genome. From outside to the center: Genes on both strands, genes on foward strand, genes on reverse strand and genes colored by COG categories.
© Copyright Policy - open-access
Related In: Results  -  Collection

License
Show All Figures
getmorefigures.php?uid=PMC3569394&req=5

f7: Graphical circular map of Kurthia massiliensis genome. From outside to the center: Genes on both strands, genes on foward strand, genes on reverse strand and genes colored by COG categories.
Mentions: The genome is 3,199,090 bp long with a 39.26% GC content (Table 4, Figure 7). Of the 3,326 predicted genes, 3,240 were protein-coding genes, and 86 were RNAs. A total of 2,425 genes (74.8%) were assigned a putative function. The remaining genes were annotated as either hypothetical proteins or proteins of unknown functions. The distribution of genes into COGs functional categories is presented in Table 5. The properties and the statistics of the genome are summarized in Tables 4 and 5.

Bottom Line: K. massiliensis is a Gram-positive aerobic rod.Here we describe the features of this organism, together with the complete genome sequence and annotation.The 3,199,090 bp long genome contains 3,240 protein-coding genes and 86 RNA genes, including between 3 and 4 rRNA genes.

View Article: PubMed Central - PubMed

Affiliation: Aix Marseille Université, URMITE, Faculté de médecine, Aix-Marseille Université

ABSTRACT
Kurthia massiliensis strain JC30(T) sp. nov. is the type strain of K. massiliensis sp. nov., a new species within the genus Kurthia. This strain, whose genome is described here, was isolated from the fecal flora of a healthy patient. K. massiliensis is a Gram-positive aerobic rod. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 3,199,090 bp long genome contains 3,240 protein-coding genes and 86 RNA genes, including between 3 and 4 rRNA genes.

No MeSH data available.


Related in: MedlinePlus