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Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9.

Neupane S, Högberg N, Alström S, Lucas S, Han J, Lapidus A, Cheng JF, Bruce D, Goodwin L, Pitluck S, Peters L, Ovchinnikova G, Lu M, Han C, Detter JC, Tapia R, Fiebig A, Land M, Hauser L, Kyrpides NC, Ivanova N, Pagani I, Klenk HP, Woyke T, Finlay RD - Stand Genomic Sci (2012)

Bottom Line: Serratia plymuthica are plant-associated, plant beneficial species belonging to the family Enterobacteriaceae.S. plymuthica AS9 is of special interest for its ability to inhibit fungal pathogens of rapeseed and to promote plant growth.The genome of S. plymuthica AS9 comprises a 5,442,880 bp long circular chromosome that consists of 4,952 protein-coding genes, 87 tRNA genes and 7 rRNA operons.

View Article: PubMed Central - PubMed

ABSTRACT
Serratia plymuthica are plant-associated, plant beneficial species belonging to the family Enterobacteriaceae. The members of the genus Serratia are ubiquitous in nature and their life style varies from endophytic to free-living. S. plymuthica AS9 is of special interest for its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The genome of S. plymuthica AS9 comprises a 5,442,880 bp long circular chromosome that consists of 4,952 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome is part of the project entitled "Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens" awarded through the 2010 DOE-JGI Community Sequencing Program (CSP2010).

No MeSH data available.


Scanning electron micrograph of S. plymuthica AS9
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f2: Scanning electron micrograph of S. plymuthica AS9

Mentions: S. plymuthica AS9 is a Gram-negative, rod shaped, motile bacterium, 1-2 µm long and 0.5-0.7 µm wide (Figure 2 and Table 1) . It forms red to pink colored colonies 1-2 mm in diameter on tryptic soy agar and potato dextrose agar. The color of the bacterium is the result of its production of the red pigment, prodigiosin, but the colony color or production of pigment depends on the ingredients, pH of the medium and the incubation temperature [26-28]. S. plymuthica is a facultative anaerobe, grows between 4 °C and 40 °C and within the pH range 4 - 10. It can utilize a wide range of carbon sources and also has chitinolytic, proteolytic, cellulolytic, and phospholytic activity [5].


Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9.

Neupane S, Högberg N, Alström S, Lucas S, Han J, Lapidus A, Cheng JF, Bruce D, Goodwin L, Pitluck S, Peters L, Ovchinnikova G, Lu M, Han C, Detter JC, Tapia R, Fiebig A, Land M, Hauser L, Kyrpides NC, Ivanova N, Pagani I, Klenk HP, Woyke T, Finlay RD - Stand Genomic Sci (2012)

Scanning electron micrograph of S. plymuthica AS9
© Copyright Policy
Related In: Results  -  Collection

Show All Figures
getmorefigures.php?uid=PMC3368398&req=5

f2: Scanning electron micrograph of S. plymuthica AS9
Mentions: S. plymuthica AS9 is a Gram-negative, rod shaped, motile bacterium, 1-2 µm long and 0.5-0.7 µm wide (Figure 2 and Table 1) . It forms red to pink colored colonies 1-2 mm in diameter on tryptic soy agar and potato dextrose agar. The color of the bacterium is the result of its production of the red pigment, prodigiosin, but the colony color or production of pigment depends on the ingredients, pH of the medium and the incubation temperature [26-28]. S. plymuthica is a facultative anaerobe, grows between 4 °C and 40 °C and within the pH range 4 - 10. It can utilize a wide range of carbon sources and also has chitinolytic, proteolytic, cellulolytic, and phospholytic activity [5].

Bottom Line: Serratia plymuthica are plant-associated, plant beneficial species belonging to the family Enterobacteriaceae.S. plymuthica AS9 is of special interest for its ability to inhibit fungal pathogens of rapeseed and to promote plant growth.The genome of S. plymuthica AS9 comprises a 5,442,880 bp long circular chromosome that consists of 4,952 protein-coding genes, 87 tRNA genes and 7 rRNA operons.

View Article: PubMed Central - PubMed

ABSTRACT
Serratia plymuthica are plant-associated, plant beneficial species belonging to the family Enterobacteriaceae. The members of the genus Serratia are ubiquitous in nature and their life style varies from endophytic to free-living. S. plymuthica AS9 is of special interest for its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The genome of S. plymuthica AS9 comprises a 5,442,880 bp long circular chromosome that consists of 4,952 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome is part of the project entitled "Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens" awarded through the 2010 DOE-JGI Community Sequencing Program (CSP2010).

No MeSH data available.